7RV2
Crystal structure of the BCL6 BTB domain in complex with OICR-8828
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-11-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 30.825, 72.896, 55.539 |
Unit cell angles | 90.00, 106.58, 90.00 |
Refinement procedure
Resolution | 36.450 - 1.290 |
R-factor | 0.144 |
Rwork | 0.143 |
R-free | 0.15640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1r29 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.690 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.230 | 1.360 |
High resolution limit [Å] | 1.290 | 1.290 |
Rmerge | 0.039 | 0.483 |
Rmeas | 0.051 | 0.625 |
Rpim | 0.031 | 0.393 |
Number of reflections | 29434 | 4263 |
<I/σ(I)> | 16.6 | 2.6 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 4.3 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 292 | Co-crystal in Ammonium sulfate, Na Acetate pH 5.2. Crystal soaked in Hepes pH 7.4 before freezing. |