Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7RUY

Crystal structure of the BCL6 BTB domain in complex with OICR-8388

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2012-06-18
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00
Spacegroup nameC 1 2 1
Unit cell lengths30.447, 72.180, 55.538
Unit cell angles90.00, 107.13, 90.00
Refinement procedure
Resolution27.250 - 1.270
R-factor0.1448
Rwork0.143
R-free0.17110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1r29
RMSD bond length0.012
RMSD bond angle1.287
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.1_4122+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.2501.340
High resolution limit [Å]1.2701.270
Rmerge0.0410.397
Rmeas0.0530.513
Rpim0.0330.320
Number of reflections283644075
<I/σ(I)>163
Completeness [%]93.792.7
Redundancy4.14.1
CC(1/2)0.9900.780
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.8292sodium formate, sodium acetate, pH 4.8

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon