7RTS
Crystal structure of the TIR domain from the grapevine disease resistance protein RUN1 without the AE interface
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 50.370, 50.370, 120.313 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.460 - 1.740 |
R-factor | 0.1991 |
Rwork | 0.198 |
R-free | 0.22900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6o0w |
RMSD bond length | 0.006 |
RMSD bond angle | 0.745 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.460 | 1.801 |
High resolution limit [Å] | 1.739 | 1.739 |
Rmerge | 0.048 | 0.493 |
Rmeas | 0.049 | 0.503 |
Number of reflections | 16661 | 1600 |
<I/σ(I)> | 41.33 | 6.04 |
Completeness [%] | 99.8 | |
Redundancy | 25.8 | |
CC(1/2) | 1.000 | 0.978 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M sodium acetate pH 4.6, 1.8 M ammonium sulfate |