7RRK
Crystal structure of fast switching M159E mutant of fluorescent protein Dronpa (Dronpa2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 79.825, 85.732, 143.050 |
Unit cell angles | 90.00, 95.05, 90.00 |
Refinement procedure
Resolution | 37.730 - 1.929 |
R-factor | 0.2435 |
Rwork | 0.242 |
R-free | 0.26600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uts |
RMSD bond length | 0.005 |
RMSD bond angle | 1.060 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.13rc2_2986) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.284 | 1.998 |
High resolution limit [Å] | 1.929 | 1.929 |
Rmerge | 0.135 | 1.700 |
Rmeas | 0.140 | 1.770 |
Rpim | 0.039 | 0.500 |
Number of reflections | 139109 | 13363 |
<I/σ(I)> | 10.8 | 1.2 |
Completeness [%] | 95.9 | 92.7 |
Redundancy | 12.5 | 11.5 |
CC(1/2) | 0.998 | 0.735 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 292 | 0.1 M Tris-HCl pH 7.4, 0.1 M MgCl2, 18% PEG 3350 |