7RMX
Structure of De Novo designed tunable symmetric protein pockets
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-04-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.99997 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 58.091, 97.212, 36.266 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.610 - 1.650 |
R-factor | 0.1876 |
Rwork | 0.186 |
R-free | 0.21500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | De novo Designed Model |
RMSD bond length | 0.011 |
RMSD bond angle | 0.966 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.15rc3_3435) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.700 |
High resolution limit [Å] | 1.640 | 1.640 |
Number of reflections | 25328 | 2417 |
<I/σ(I)> | 10.59 | 1.27 |
Completeness [%] | 99.0 | |
Redundancy | 7.7 | |
CC(1/2) | 0.998 | 0.821 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | PEG 20000, glycerol, sodium L-glutamate, DL-alanine, glycine, DL-lysine HCl, DL-serine, MES/imidazole |