Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7RMJ

Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor (S)-N-(1-(3-(4-chloro-3-(methylsulfonamido)-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-1-yn-1-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl)acetamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2021-07-02
DetectorRDI CMOS_8M
Wavelength(s)1.00003
Spacegroup nameP 6
Unit cell lengths160.023, 160.023, 57.598
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.290 - 2.270
R-factor0.2156
Rwork0.214
R-free0.24810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vkv
RMSD bond length0.003
RMSD bond angle0.637
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.310
High resolution limit [Å]2.2702.270
Rmerge0.2000.777
Number of reflections390801866
<I/σ(I)>9.81.1
Completeness [%]99.795.4
Redundancy10.13.4
CC(1/2)0.601
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277.150.125M NaI, 4.5% Peg 3350, 6% glycerol, 0.1M sodium cacodylate pH 6.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon