7RMD
Crystal structure of the first bromodomain of human BRD4 in complex with SJ001011461-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.634, 44.740, 78.236 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.120 - 1.180 |
R-factor | 0.1544 |
Rwork | 0.153 |
R-free | 0.17350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mxf |
RMSD bond length | 0.018 |
RMSD bond angle | 1.730 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER (1.19rc5_4047) |
Refinement software | PHENIX (1.19rc5_4047) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.120 | 1.222 |
High resolution limit [Å] | 1.180 | 1.180 |
Rmerge | 0.361 | |
Number of reflections | 42281 | 3600 |
<I/σ(I)> | 22.09 | |
Completeness [%] | 98.2 | 85.3 |
Redundancy | 10.2 | 6.8 |
CC(1/2) | 0.999 | 0.948 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Bis-Tris, pH 6.8, 20% PEG3350, 15% ethylene glycol |