7RK5
Mannitol-2-dehydrogenase bound to NADH from Aspergillus fumigatus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 209.883, 71.289, 69.157 |
Unit cell angles | 90.00, 101.15, 90.00 |
Refinement procedure
Resolution | 45.460 - 2.100 |
R-factor | 0.1927 |
Rwork | 0.190 |
R-free | 0.24920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rk4 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.16-3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.464 | 45.460 | 2.160 |
High resolution limit [Å] | 2.100 | 9.150 | 2.100 |
Rmerge | 0.164 | 0.095 | 1.806 |
Rmeas | 0.178 | 0.103 | 1.957 |
Rpim | 0.069 | 0.039 | 0.747 |
Total number of observations | 4858 | 30127 | |
Number of reflections | 58465 | 748 | 4519 |
<I/σ(I)> | 8.6 | 18.7 | 1.8 |
Completeness [%] | 99.7 | 98.7 | 99.9 |
Redundancy | 6.6 | 6.5 | 6.7 |
CC(1/2) | 0.992 | 0.990 | 0.535 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289.15 | 25% PEG 4000, 0.25 M lithium sulphate, 0.1 M Tris pH 8.5 |