7RIY
RNA polymerase II elongation complex with hairpin polyamide Py-Im 1, scaffold 2 soaked with UTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-10-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 167.775, 222.760, 192.956 |
Unit cell angles | 90.00, 100.54, 90.00 |
Refinement procedure
Resolution | 49.533 - 3.700 |
R-factor | 0.2331 |
Rwork | 0.232 |
R-free | 0.28060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rim |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.533 | 49.530 | 3.700 |
High resolution limit [Å] | 3.630 | 18.510 | 3.630 |
Rmerge | 0.521 | 0.075 | 3.075 |
Rmeas | 0.559 | 0.082 | 3.297 |
Rpim | 0.202 | 0.032 | 1.186 |
Total number of observations | 3683 | 34030 | |
Number of reflections | 78506 | 585 | 4429 |
<I/σ(I)> | 4.5 | 19.9 | 0.9 |
Completeness [%] | 99.9 | 94 | 100 |
Redundancy | 7.6 | 6.3 | 7.7 |
CC(1/2) | 0.979 | 0.995 | 0.288 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 390mM (NH4)2HPO4/NaH2PO4, pH 6.5, 5mM dioxane, 5mM DTT, 10-12% PEG6000 |