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7RIY

RNA polymerase II elongation complex with hairpin polyamide Py-Im 1, scaffold 2 soaked with UTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2019-10-03
DetectorADSC QUANTUM 315r
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths167.775, 222.760, 192.956
Unit cell angles90.00, 100.54, 90.00
Refinement procedure
Resolution49.533 - 3.700
R-factor0.2331
Rwork0.232
R-free0.28060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7rim
Data reduction softwareMOSFLM
Data scaling softwareAimless (0.7.3)
Phasing softwarePHASER
Refinement softwarePHENIX (1.13)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.53349.5303.700
High resolution limit [Å]3.63018.5103.630
Rmerge0.5210.0753.075
Rmeas0.5590.0823.297
Rpim0.2020.0321.186
Total number of observations368334030
Number of reflections785065854429
<I/σ(I)>4.519.90.9
Completeness [%]99.994100
Redundancy7.66.37.7
CC(1/2)0.9790.9950.288
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5298390mM (NH4)2HPO4/NaH2PO4, pH 6.5, 5mM dioxane, 5mM DTT, 10-12% PEG6000

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PDB entries from 2024-05-15

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