Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7RGB

O2-, PLP-dependent desaturase Plu4 product-bound enzyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-05-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameP 1 21 1
Unit cell lengths76.372, 72.186, 139.626
Unit cell angles90.00, 98.44, 90.00
Refinement procedure
Resolution37.772 - 2.500
R-factor0.236
Rwork0.234
R-free0.26930
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6c3d
Data reduction softwareXDS
Data scaling softwareAimless (0.7.1)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.74039.7402.580
High resolution limit [Å]2.50010.3102.500
Rmerge0.2600.0745.508
Rmeas0.2700.0765.741
Rpim0.0730.0201.576
Total number of observations7064481109958431
Number of reflections517957964444
<I/σ(I)>7.317.31.5
Completeness [%]99.198.598
Redundancy13.613.913.1
CC(1/2)0.9950.9980.486
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M Bis-Tris:HCl; 27% PEG 3350; 0.2 M ammonium acetate; microseeded from crystals grown at pH 6.0; soaked with 2 mM PLP and 3 mM L-arginine for 16 h

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon