7RBG
Human DNA polymerase beta crosslinked ternary complex 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-01 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97931 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.510, 78.430, 57.190 |
Unit cell angles | 90.00, 113.22, 90.00 |
Refinement procedure
Resolution | 51.070 - 1.900 |
R-factor | 0.1811 |
Rwork | 0.179 |
R-free | 0.22250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kld |
RMSD bond length | 0.008 |
RMSD bond angle | 1.483 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.560 | 52.560 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.074 | 0.027 | 0.385 |
Rmeas | 0.087 | 0.033 | 0.459 |
Rpim | 0.045 | 0.019 | 0.247 |
Total number of observations | 112661 | 944 | 6250 |
Number of reflections | 32605 | 299 | 2028 |
<I/σ(I)> | 12 | 28 | 3.2 |
Completeness [%] | 91.5 | 86.4 | 88.3 |
Redundancy | 3.5 | 3.2 | 3.1 |
CC(1/2) | 0.996 | 0.994 | 0.581 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 0.1 M Citrate pH 5.5, 18% PEG6000 |