7R2L
Human Cyclophilin D in complex with N-(4-aminophenyl)-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-10-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97926 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 57.141, 57.141, 87.692 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.870 - 1.100 |
| R-factor | 0.1349 |
| Rwork | 0.134 |
| R-free | 0.15330 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7r2h |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.968 |
| Data reduction software | autoPROC |
| Data scaling software | autoPROC |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.870 | 1.139 |
| High resolution limit [Å] | 1.100 | 1.100 |
| Number of reflections | 55469 | 3538 |
| <I/σ(I)> | 28.39 | |
| Completeness [%] | 93.1 | |
| Redundancy | 15.2 | |
| CC(1/2) | 1.000 | 0.794 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277.15 | 15 % PEG 3350, 0.1M K2HPO4 |






