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7R2L

Human Cyclophilin D in complex with N-(4-aminophenyl)-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-29
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97926
Spacegroup nameP 41 21 2
Unit cell lengths57.141, 57.141, 87.692
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.870 - 1.100
R-factor0.1349
Rwork0.134
R-free0.15330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7r2h
RMSD bond length0.007
RMSD bond angle0.968
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8701.139
High resolution limit [Å]1.1001.100
Number of reflections554693538
<I/σ(I)>28.39
Completeness [%]93.1
Redundancy15.2
CC(1/2)1.0000.794
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7277.1515 % PEG 3350, 0.1M K2HPO4

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