7R2H
0.79A resolution structure of DMSO bound Cyclophilin D
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-03-23 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.8265 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 57.348, 57.348, 87.562 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 36.800 - 0.790 |
| R-factor | 0.144 |
| Rwork | 0.143 |
| R-free | 0.15490 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6r8w |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.906 |
| Data reduction software | autoPROC (1.0.5) |
| Data scaling software | autoPROC (1.0.5) |
| Phasing software | PHASER (ccp4i 7.0) |
| Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 36.800 | 0.818 |
| High resolution limit [Å] | 0.790 | 0.790 |
| Number of reflections | 148904 | 12036 |
| <I/σ(I)> | 12.96 | |
| Completeness [%] | 93.5 | |
| Redundancy | 5.2 | |
| CC(1/2) | 0.999 | 0.623 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277.15 | 15 % PEG 3350, 0.1M K2HPO4 |






