7QYS
Crystal structure of RimK from Pseudomonas syringae DC3000
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 95.905, 96.091, 156.992 |
Unit cell angles | 88.94, 84.37, 89.97 |
Refinement procedure
Resolution | 49.800 - 2.900 |
R-factor | 0.2377 |
Rwork | 0.237 |
R-free | 0.24790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4iwx |
RMSD bond length | 0.004 |
RMSD bond angle | 1.296 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.800 | 49.800 | 2.950 |
High resolution limit [Å] | 2.900 | 15.880 | 2.900 |
Rmerge | 0.161 | 0.048 | 0.976 |
Rmeas | 0.192 | 0.059 | 1.174 |
Rpim | 0.102 | 0.034 | 0.644 |
Total number of observations | 2249 | 19555 | |
Number of reflections | 122285 | 726 | 6015 |
<I/σ(I)> | 5.8 | 13.4 | 1.1 |
Completeness [%] | 98.9 | 96.9 | 98.6 |
Redundancy | 3.4 | 3.1 | 3.3 |
CC(1/2) | 0.983 | 0.989 | 0.430 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | NULL |