7QVO
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with guanidine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96546 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 51.039, 68.512, 116.685 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.760 - 1.620 |
R-factor | 0.186 |
Rwork | 0.185 |
R-free | 0.20600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zct |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.760 | 46.760 | 1.600 |
High resolution limit [Å] | 1.510 | 4.500 | 1.510 |
Rmerge | 0.040 | 0.018 | 1.230 |
Rmeas | 0.050 | 0.022 | 2.638 |
Total number of observations | 158098 | ||
Number of reflections | 60513 | 2307 | 9578 |
<I/σ(I)> | 11.62 | 52.07 | 0.47 |
Completeness [%] | 96.8 | 98.3 | 94.6 |
Redundancy | 2.613 | 2.713 | 2.572 |
CC(1/2) | 0.999 | 0.999 | 0.290 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291.15 | PEG 4000 19%, TRIS pH8 0.1M Guanidine HCl 6-7-8-9-10% Glycerol 5-6-7% |