7QTZ
Crystal structure of Iripin-1 serpin from tick Ixodes ricinus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-09 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.918400 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.819, 91.005, 95.833 |
Unit cell angles | 90.00, 97.53, 90.00 |
Refinement procedure
Resolution | 48.440 - 2.100 |
R-factor | 0.1933 |
Rwork | 0.190 |
R-free | 0.25060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nda |
RMSD bond length | 0.007 |
RMSD bond angle | 1.417 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 95.006 | 48.398 | 2.210 |
High resolution limit [Å] | 2.097 | 6.630 | 2.100 |
Rmerge | 0.034 | 1.090 | |
Rmeas | 0.144 | 0.037 | 1.179 |
Rpim | 0.055 | 0.015 | 0.446 |
Total number of observations | 331161 | 10153 | 47549 |
Number of reflections | 48379 | 1584 | 6953 |
<I/σ(I)> | 10.7 | 39.4 | 1.7 |
Completeness [%] | 99.2 | 99 | 97.7 |
Redundancy | 6.8 | 6.4 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | Nickel(II) sufate hexahydrate, Hepes, Jeffamine M-600 |