7QT1
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex with substitution e170N
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-02 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.873128 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 108.942, 106.604, 191.968 |
Unit cell angles | 90.00, 98.78, 90.00 |
Refinement procedure
Resolution | 29.290 - 2.100 |
R-factor | 0.1633 |
Rwork | 0.163 |
R-free | 0.18570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ura |
Data reduction software | XDS (20210323) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.290 | 29.286 | 2.210 |
High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
Rmerge | 0.068 | 0.710 | |
Rmeas | 0.239 | 0.075 | 0.777 |
Rpim | 0.096 | 0.031 | 0.311 |
Total number of observations | 22987 | 112922 | |
Number of reflections | 126281 | 4004 | 18399 |
<I/σ(I)> | 7.1 | 17.7 | 2.4 |
Completeness [%] | 99.9 | 97.3 | 100 |
Redundancy | 6 | 5.7 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.1 | 288 | Purified enzyme (3.25 mg/mL) in 25 mM Tricine-NaOH, 75 mM NaCl, pH 8.0 was incubated at 3% (v/v) CO2 in air and 30 degrees C for 1 h in the presence of 0.182 mM CABP and 2.9 mM MgCl2. The enzyme was then mixed in a 1:1 ratio with 0.2 M Bis-Tris propane, 20 % (w/v) polyethylene glycol 4000, pH 9.1. Before flash freezing the crystals in liquid nitrogen PEG200 was added to the mother liquor as cryoprotectant to a final concentration of 33 % (w/v). |