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7QSY

Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-09
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.873128
Spacegroup nameI 1 2 1
Unit cell lengths109.352, 106.608, 192.289
Unit cell angles90.00, 98.74, 90.00
Refinement procedure
Resolution29.340 - 2.100
R-factor0.1708
Rwork0.170
R-free0.19690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ura
Data reduction softwareXDS (20210323)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHENIX (1.18.2_3874)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.82929.8292.210
High resolution limit [Å]2.1006.6402.100
Rmerge0.0880.607
Rmeas0.2440.0960.656
Rpim0.0920.0360.245
Total number of observations85691024308127353
Number of reflections124497361018077
<I/σ(I)>6.313.72.6
Completeness [%]98.187.397.8
Redundancy6.96.77
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.7288Purified enzyme (5 mg/mL) in 25 mM Tricine-NaOH, 75 mM NaCl, pH 8.0 was incubated at 3% (v/v) CO2 in air and 30 degrees C for 1 h in the presence of 0.2 mM CABP and 3.2 mM MgCl2. The enzyme was then mixed in a 1:1 ratio with 0.2 M Hepes, 20 % (w/v) polyethylene glycol 4000, pH 7.7. Before flash freezing the crystals in liquid nitrogen PEG200 was added to the mother liquor as cryoprotectant to a final concentration of 40 % (w/v).

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PDB entries from 2024-05-15

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