Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QSW

L8S8-complex forming RubisCO derived from ancestral sequence reconstruction of the last common ancestor of SSU-bearing Form I RubisCOs

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-08-20
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97626
Spacegroup nameP 43 21 2
Unit cell lengths131.873, 131.873, 305.463
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.960 - 1.800
R-factor0.1408
Rwork0.141
R-free0.15920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ura
Data reduction softwareXDS (20210323)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHENIX (1.18.2_3874)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.96319.9631.900
High resolution limit [Å]1.8005.6901.800
Rmerge0.0501.015
Rmeas0.1280.0521.054
Rpim0.0340.0140.282
Total number of observations3394733108989492040
Number of reflections247678825635779
<I/σ(I)>15.3432.8
Completeness [%]99.997.7100
Redundancy13.713.213.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP9.4288Purified enzyme (1.5 mg/mL) in 25 mM Tricine-NaOH, 75 mM NaCl, pH 8.0 was incubated at 3% (v/v) CO2 in air and 30 degrees C for 1 h in the presence of 0.125 mM CABP and 2 mM MgCl2. The enzyme was then mixed in a 1:1 ratio with 0.2 M Bis-Tris propane, 20 % (w/v) polyethylene glycol 4000, pH 9.4. Before flash freezing the crystals in liquid nitrogen PEG200 was added to the mother liquor as cryoprotectant to a final concentration of 33 % (w/v).

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon