7QS5
Crystal structure of B30.2 PRYSPRY domain of TRIM67
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-20 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.99981 |
Spacegroup name | I 41 |
Unit cell lengths | 135.392, 135.392, 35.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.870 - 1.650 |
R-factor | 0.1559 |
Rwork | 0.155 |
R-free | 0.17710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7b2s |
RMSD bond length | 0.016 |
RMSD bond angle | 1.505 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.870 | 47.870 | 1.690 |
High resolution limit [Å] | 1.650 | 7.380 | 1.650 |
Rmerge | 0.063 | 0.056 | 0.947 |
Rmeas | 0.069 | 0.059 | 1.050 |
Rpim | 0.021 | 0.019 | 0.319 |
Number of reflections | 39503 | 489 | 2917 |
<I/σ(I)> | 17.7 | 2.4 | |
Completeness [%] | 99.9 | 99.6 | 100 |
Redundancy | 10.6 | 10.1 | 10.8 |
CC(1/2) | 0.999 | 0.994 | 0.851 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293.15 | 20% high molecular weight PEG Smears, 0.1M acetate pH 4.5 |