7QS2
Crystal structure of B30.2 PRYSPRY domain of TRIM15
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00004 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 54.764, 54.764, 125.265 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.230 - 1.700 |
R-factor | 0.1703 |
Rwork | 0.169 |
R-free | 0.19900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6umb |
RMSD bond length | 0.015 |
RMSD bond angle | 1.571 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.230 | 41.230 | 1.740 |
High resolution limit [Å] | 1.700 | 8.500 | 1.700 |
Rmerge | 0.112 | 0.045 | 1.221 |
Rmeas | 0.123 | 0.048 | 1.174 |
Rpim | 0.035 | 0.015 | 0.352 |
Number of reflections | 21814 | 228 | 1267 |
<I/σ(I)> | 15.7 | 2.2 | |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 12.2 | 9.5 | 12.5 |
CC(1/2) | 0.999 | 0.998 | 0.767 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 20% PEG3350, 10% ethylene glycol, 0.1M bis-tris-propane pH 6.5, 0.2M sodium iodide |