7QS0
Crystal structure of B30.2 PRYSPRY domain of TRIM10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-04 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.00002 |
Spacegroup name | P 32 |
Unit cell lengths | 65.991, 65.991, 103.312 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.320 - 2.300 |
R-factor | 0.2065 |
Rwork | 0.204 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6umb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.295 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.320 | 38.320 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.090 | 0.062 | 0.351 |
Rmeas | 0.101 | 0.066 | 0.401 |
Rpim | 0.034 | 0.022 | 0.133 |
Number of reflections | 22199 | 385 | 2174 |
<I/σ(I)> | 3.4 | 1.8 | |
Completeness [%] | 99.2 | 97.6 | 100 |
Redundancy | 8.7 | 9.2 | 9 |
CC(1/2) | 0.997 | 0.997 | 0.986 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | 25% ethylene glycol |