7QRY
Crystal structure of B30.2 PRYSPRY domain of MID1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-25 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 1 |
Unit cell lengths | 38.863, 51.763, 80.380 |
Unit cell angles | 103.76, 92.64, 94.33 |
Refinement procedure
Resolution | 47.710 - 2.070 |
R-factor | 0.2291 |
Rwork | 0.227 |
R-free | 0.27260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jbm |
RMSD bond length | 0.010 |
RMSD bond angle | 1.293 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.710 | 47.710 | 2.140 |
High resolution limit [Å] | 2.070 | 8.020 | 2.070 |
Rmerge | 0.114 | 0.092 | 0.472 |
Rmeas | 0.146 | 0.103 | 0.625 |
Rpim | 0.070 | 0.047 | 0.303 |
Number of reflections | 35045 | 628 | 3431 |
<I/σ(I)> | 5.5 | 2 | |
Completeness [%] | 95.0 | 98.7 | 94.6 |
Redundancy | 4 | 4.3 | 4 |
CC(1/2) | 0.990 | 0.980 | 0.867 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.25 | 293.15 | 1.1M sodium citrate, 0.1M HEPES 7.25 |