7QRF
Structure of the dimeric complex between precursor membrane ectodomain (prM) and envelope protein ectodomain (E) from tick-borne encephalitis virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97934 |
Spacegroup name | H 3 2 |
Unit cell lengths | 155.730, 155.730, 161.880 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.420 - 2.280 |
R-factor | 0.183 |
Rwork | 0.181 |
R-free | 0.21300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1svb 3c5x |
RMSD bond length | 0.010 |
RMSD bond angle | 1.160 |
Data reduction software | XDS (Feb 5 2021) |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.000 | 2.435 |
High resolution limit [Å] | 2.280 | 2.280 |
Rmerge | 0.096 | 2.623 |
Rmeas | 0.099 | 2.699 |
Rpim | 0.023 | 0.891 |
Number of reflections | 28985 | 1449 |
<I/σ(I)> | 19.8 | |
Completeness [%] | 95.0 | |
Redundancy | 19.5 | |
CC(1/2) | 0.998 | 0.323 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 3.5 | 293 | 0.2M Li(SO4), 0.1M Na citrate pH 3.5, 28% (v/v) PEG 400 |