7QQI
Sucrose phosphorylase from Faecalibaculum rodentium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-25 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.965459 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.798, 94.409, 104.772 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.000 - 1.360 |
Rwork | 0.149 |
R-free | 0.18530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6s9v |
RMSD bond length | 0.008 |
RMSD bond angle | 1.364 |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.000 | 45.810 | 1.380 |
High resolution limit [Å] | 1.360 | 7.450 | 1.360 |
Rmerge | 0.076 | 0.026 | 1.270 |
Rmeas | 0.095 | 0.032 | 1.583 |
Rpim | 0.056 | 0.019 | 0.933 |
Number of reflections | 95834 | 660 | 4676 |
<I/σ(I)> | 10.7 | ||
Completeness [%] | 99.7 | ||
Redundancy | 5 | 4.5 | 5 |
CC(1/2) | 0.999 | 0.999 | 0.450 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | Protein was concentrated to 30 mg/ml in 25 mM Tris, pH 7.8, 100 mM NaCl. Drops were prepared by mixing protein and reservoir solution at a 1:1 volume ratio. Composition reservoir solution: 1 M Na citrate, 0.1 M Tris, pH 7.0, 0.2 M NaCl |