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7QP2

1-deazaguanosine modified-RNA Sarcin Ricin Loop

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-18
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.9
Spacegroup nameP 43
Unit cell lengths29.480, 29.480, 76.490
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.480 - 0.900
R-factor0.1171
Rwork0.116
R-free0.13750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3dvz
RMSD bond length0.007
RMSD bond angle1.282
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0000.920
High resolution limit [Å]0.9000.900
Number of reflections481423548
<I/σ(I)>35.27
Completeness [%]100.0
Redundancy20
CC(1/2)1.0000.400
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72933.2 M (NH4)2SO4, 50 mM K-MOPS pH 7.0, 10 mM MgCl2, 10 mM MnCl2

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PDB entries from 2024-05-15

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