7QOZ
Crystal structure of NAD-bound glycosomal malate dehydrogenase from Trypanosoma cruzi
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2021-01-01 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.033184 |
| Spacegroup name | P 1 |
| Unit cell lengths | 80.481, 84.802, 113.459 |
| Unit cell angles | 97.60, 100.44, 110.08 |
Refinement procedure
| Resolution | 46.840 - 1.850 |
| R-factor | 0.176 |
| Rwork | 0.174 |
| R-free | 0.20800 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7nrz |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.871 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.840 | 1.880 |
| High resolution limit [Å] | 1.850 | 1.850 |
| Rmerge | 0.073 | 0.880 |
| Number of reflections | 211514 | 10690 |
| <I/σ(I)> | 6 | |
| Completeness [%] | 91.4 | |
| Redundancy | 3.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | Morpheus B3 10% PEG 4000, 20% glycerol, 0.03M of each halide - Sodium floride, Sodium bromide, Sodium Iodide, 0.1M MES-imidazole pH6.5 |
