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7QOD

Native structure of a small alarmone hydrolase (RelH) from Corynebacterium glutamicum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-28
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97624
Spacegroup nameP 63
Unit cell lengths94.332, 94.332, 80.561
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.430 - 1.850
R-factor0.178
Rwork0.177
R-free0.20630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)SeMet RelH
Data reduction softwareXDS (20190315)
Data scaling softwareXDS (20190315)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (1.19.2)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.70340.7031.960
High resolution limit [Å]1.8505.5001.850
Rmerge0.0840.0531.475
Rmeas0.0960.0611.691
Total number of observations282347
Number of reflections67471256210790
<I/σ(I)>8.8226.350.89
Completeness [%]98.598.297.5
Redundancy4.1854.2614.155
CC(1/2)0.9960.9950.377
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7293.150.1 M imidazole, 12% (w/v) PEG 20000

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PDB entries from 2024-05-15

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