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7QIH

Complex of the Yersinia enterocolitica Type III secretion proteins YscX and YscY

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.2
Synchrotron siteBESSY
Beamline14.2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-28
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.9184
Spacegroup nameP 21 21 2
Unit cell lengths41.553, 140.833, 59.880
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.620 - 1.920
R-factor0.2226
Rwork0.221
R-free0.26240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)AlphaFold2 model
RMSD bond length0.002
RMSD bond angle0.389
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.6202.030
High resolution limit [Å]1.9201.920
Rmeas0.1022.941
Number of reflections277134312
<I/σ(I)>16.40.78
Completeness [%]99.798
Redundancy12.7811.29
CC(1/2)1.0000.446
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6293Protein Concentration: 3-5 mg/mL; Protein Buffer: 20 mM Tris pH 8.0, 150 mM NaCl, 5 mM TCEP; Reservoir Solution: 0.1 M BisTris pH 6.0, 0.2 M MgCl2, 13-21 % PEG 3350; Drop Ratio: 0.33 uL Reservoir + 0.66 uL Protein

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