7QIB
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979340 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.045, 89.957, 95.217 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.800 - 1.600 |
R-factor | 0.1751 |
Rwork | 0.174 |
R-free | 0.19620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7pvl |
RMSD bond length | 0.006 |
RMSD bond angle | 0.781 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.800 | 1.680 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.064 | 1.240 |
Rmeas | 0.071 | 1.376 |
Rpim | 0.030 | 0.589 |
Number of reflections | 80077 | 11135 |
<I/σ(I)> | 13.6 | 1.4 |
Completeness [%] | 99.3 | 95.7 |
Redundancy | 5.4 | 5.3 |
CC(1/2) | 0.999 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.1 M Tris pH 8.5; 0.2 M MgCl2; 25% PEG 3350 |