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7QFJ

Crystal structure of S-layer protein SlpX from Lactobacillus acidophilus, domain II (aa 194-362)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 11.2C
Synchrotron siteELETTRA
Beamline11.2C
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-18
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.94290
Spacegroup nameP 1 21 1
Unit cell lengths65.679, 143.016, 73.441
Unit cell angles90.00, 96.70, 90.00
Refinement procedure
Resolution46.028 - 2.500
Rwork0.206
R-free0.24250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)RoseTTAfold ab initio prediction
RMSD bond length0.006
RMSD bond angle1.336
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6302.590
High resolution limit [Å]2.5002.500
Rmerge0.0840.600
Rmeas0.1000.715
Rpim0.0530.384
Number of reflections465014625
<I/σ(I)>17.1
Completeness [%]99.9
Redundancy6.86.7
CC(1/2)0.9980.866
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8293.15Protein stock solution of 10 mg/mL in 20 mM Hepes pH 8 and 100 mM NaCl; Midas screen condition 50 (0.1M Tris, 50% v/v Pentaerythritol propoxylate (5/4 PO/OH)) with protein end concentration of 5 mg/mL corresponding to 50% of protein solution in the 1.0 uL drop, co-crystallization with 0.1 ul 2mM HgCl2

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PDB entries from 2024-05-15

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