7QD3
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with morpholine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96456 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 50.698, 68.653, 117.924 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.960 - 2.430 |
R-factor | 0.2292 |
Rwork | 0.227 |
R-free | 0.27880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zct |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 58.960 | 58.960 | 2.520 |
High resolution limit [Å] | 2.430 | 9.080 | 2.430 |
Rmerge | 0.118 | 0.047 | 1.067 |
Rmeas | 0.131 | 0.055 | 1.189 |
Rpim | 0.056 | 0.027 | 0.514 |
Total number of observations | 41491 | 709 | 1503 |
Number of reflections | 7936 | 170 | 767 |
<I/σ(I)> | 9.8 | 26.5 | 1.4 |
Completeness [%] | 98.5 | 94.5 | 94.9 |
Redundancy | 2 | 4.2 | 2 |
CC(1/2) | 0.996 | 0.996 | 0.567 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 291.15 | PEG 4000 19%, TRIS pH8 0.1M Guanidine HCl 6-7-8-9-10% Glycerol 5-6-7% |