Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QCG

Structure of SARS-CoV-2 Papain-like Protease bound to N-(2-pyrrolidyl)-3,4,5-trihydroxybenzoylhydrazone

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0332
Spacegroup nameP 32 2 1
Unit cell lengths83.208, 83.208, 134.033
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution63.470 - 1.750
R-factor0.1901
Rwork0.190
R-free0.19830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7nfv
RMSD bond length0.007
RMSD bond angle0.854
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX (1.18-3855_9999)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]63.4701.813
High resolution limit [Å]1.7501.750
Number of reflections548295449
<I/σ(I)>12.39
Completeness [%]100.0
Redundancy10.5
CC(1/2)0.9990.545
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.1 M Tris-HCl pH 8.0, 10% glycerol, 0.8 M sodium dihydrogenphosphate, 1.2 M potassium hydrogenphosphate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon