7QBZ
Crystal structure Cadmium translocating P-type ATPase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-26 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 89.642, 93.665, 128.258 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.570 - 3.250 |
R-factor | 0.2194 |
Rwork | 0.217 |
R-free | 0.25490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4umw |
RMSD bond length | 0.003 |
RMSD bond angle | 0.820 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.600 | 3.370 |
High resolution limit [Å] | 3.250 | 3.250 |
Number of reflections | 17447 | 1715 |
<I/σ(I)> | 8.5 | |
Completeness [%] | 99.2 | 99.88 |
Redundancy | 6.1 | |
CC(1/2) | 0.990 | 0.370 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 292.15 | 200 mM MgCl2, 14 % (v/v) PEG1500, 10 mM tris(2-carboxyethyl)phosphine, 10 % (v/v) glycerol, 3 % 2-Methyl-2,4-pentanediol and 100 mM sodium acetate, pH=5.0. |