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7QAZ

Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 - Primer Initiation Complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-08-07
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths227.910, 39.620, 79.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.980 - 2.110
R-factor0.2123
Rwork0.210
R-free0.26080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7nqe
RMSD bond length0.007
RMSD bond angle0.979
Data reduction softwarexia2 (3.4.2)
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.9802.150
High resolution limit [Å]2.1102.110
Rmerge0.1511.042
Rmeas0.1741.382
Rpim0.0850.896
Number of reflections403761427
<I/σ(I)>6.50.6
Completeness [%]94.469.6
Redundancy3.81.9
CC(1/2)0.9920.298
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5287.150.1M Sodium HEPES; MOPS (acid) 20% v/v Ethylene glycol; 10% w/v PEG 8000 0.03M Diethylene glycol; 0.03M Triethylene glycol; 0.03M Tetraethylene glycol; 0.03M Pentaethylene glycol 400uM DNA; 500uM AMPNPP; 4mM GTP; 2mM CoCl2; 130mM Monopotassium Glutamate

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PDB entries from 2025-06-11

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