7QA7
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with Cyclopropanemethylamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9655 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 50.197, 69.361, 118.137 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.200 - 2.360 |
R-factor | 0.2014 |
Rwork | 0.199 |
R-free | 0.24910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zct |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.200 | 46.199 | 2.444 |
High resolution limit [Å] | 2.360 | 6.138 | 2.360 |
Rmerge | 0.066 | 0.029 | 1.463 |
Rmeas | 0.075 | 0.033 | 1.606 |
Rpim | 0.033 | 0.015 | 0.651 |
Total number of observations | 51552 | 2263 | 1707 |
Number of reflections | 8764 | 542 | 863 |
<I/σ(I)> | 12.4 | 35.2 | 1 |
Completeness [%] | 90.3 | 97.5 | 46.3 |
Redundancy | 2 | 4.2 | 2 |
CC(1/2) | 0.999 | 0.999 | 0.486 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 291.15 | PEG 4000 19%, TRIS pH8 0.1M 6-7-8-9-10% Guanidine HCl 5-6-7% Glycerol |