7Q94
Crystal Structure of Agrobacterium tumefaciens NADQ, DNA complex.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9762 |
Spacegroup name | P 65 |
Unit cell lengths | 104.269, 104.269, 152.149 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 77.650 - 4.300 |
R-factor | 0.2562 |
Rwork | 0.254 |
R-free | 0.30000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | native monomer |
RMSD bond length | 0.002 |
RMSD bond angle | 0.442 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 77.650 | 4.455 |
High resolution limit [Å] | 4.300 | 4.300 |
Rmerge | 0.081 | 0.783 |
Rmeas | 0.114 | |
Number of reflections | 6399 | 627 |
<I/σ(I)> | 7.14 | 1.2 |
Completeness [%] | 99.6 | |
Redundancy | 2 | 2 |
CC(1/2) | 0.994 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 100 mM HEPES, mM lithium chloride, 28% (w/v) PEG 6000 |