7Q73
Structure of Pla1 apo
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9762 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 122.060, 66.750, 88.120 |
Unit cell angles | 90.00, 118.17, 90.00 |
Refinement procedure
Resolution | 77.679 - 1.900 |
R-factor | 0.1702 |
Rwork | 0.169 |
R-free | 0.19230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hhp |
RMSD bond length | 0.003 |
RMSD bond angle | 0.550 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 77.679 | 77.679 | 1.950 |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.112 | 0.031 | 1.232 |
Rmeas | 0.122 | 0.034 | 1.336 |
Total number of observations | 333356 | ||
Number of reflections | 49224 | 587 | 3580 |
<I/σ(I)> | 11.64 | 41.92 | 1.58 |
Completeness [%] | 99.5 | 98.3 | 98.6 |
Redundancy | 6.772 | 6.298 | 6.697 |
CC(1/2) | 0.998 | 0.999 | 0.652 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.2 M lithium citrate, 20% PEG 3350 |