7Q3W
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with (R)-2-Aminobutanamide hydrochloride
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96546 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 50.918, 69.002, 116.702 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.400 - 1.750 |
R-factor | 0.1907 |
Rwork | 0.190 |
R-free | 0.20620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zct |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.396 | 59.396 | 1.591 |
High resolution limit [Å] | 1.421 | 4.670 | 1.421 |
Rmerge | 0.056 | 0.033 | 1.024 |
Rmeas | 0.065 | 0.038 | 1.148 |
Rpim | 0.032 | 0.019 | 0.510 |
Total number of observations | 105773 | 5164 | 5986 |
Number of reflections | 20816 | 1202 | 1203 |
<I/σ(I)> | 14.5 | 41.2 | 1.4 |
Completeness [%] | 92.6 | 98.8 | 78.9 |
Redundancy | 4.4 | 4.3 | 5 |
CC(1/2) | 0.988 | 0.987 | 0.537 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 291.15 | PEG 4000 19%, TRIS pH8 0.1M Guanidine HCl 6-7-8-9-10% Glycerol 5-6-7% |