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7Q3W

Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with (R)-2-Aminobutanamide hydrochloride

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-12
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.96546
Spacegroup nameI 2 2 2
Unit cell lengths50.918, 69.002, 116.702
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution59.400 - 1.750
R-factor0.1907
Rwork0.190
R-free0.20620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4zct
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (v1.19)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]59.39659.3961.591
High resolution limit [Å]1.4214.6701.421
Rmerge0.0560.0331.024
Rmeas0.0650.0381.148
Rpim0.0320.0190.510
Total number of observations10577351645986
Number of reflections2081612021203
<I/σ(I)>14.541.21.4
Completeness [%]92.698.878.9
Redundancy4.44.35
CC(1/2)0.9880.9870.537
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8291.15PEG 4000 19%, TRIS pH8 0.1M Guanidine HCl 6-7-8-9-10% Glycerol 5-6-7%

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PDB entries from 2024-05-15

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