7Q2K
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with 2-pyrrolidinone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96546 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 50.429, 68.393, 116.836 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.590 - 1.940 |
R-factor | 0.1993 |
Rwork | 0.198 |
R-free | 0.22930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zct |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.588 | 40.588 | 1.839 |
High resolution limit [Å] | 1.653 | 5.255 | 1.653 |
Rmerge | 0.038 | 0.025 | 0.935 |
Rmeas | 0.043 | 0.029 | 1.038 |
Rpim | 0.020 | 0.015 | 0.442 |
Total number of observations | 74158 | 3403 | 4416 |
Number of reflections | 15233 | 829 | 830 |
<I/σ(I)> | 18.6 | 54.1 | 1.6 |
Completeness [%] | 91.3 | 97.4 | 51 |
Redundancy | 4.5 | 4.1 | 5.3 |
CC(1/2) | 0.997 | 0.993 | 0.662 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 291.15 | PEG 4000 19%, TRIS pH8 0.1M Guanidine HCl 6-7-8-9-10% Glycerol 5-6-7% |