7Q0M
Crystal structure of the peptide transporter YePEPT-K314A in complex with LZNV at 2.66 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.398, 100.372, 103.084 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.960 - 2.540 |
R-factor | 0.2683 |
Rwork | 0.267 |
R-free | 0.29140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7q0l |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.850 | 2.748 | 2.660 |
High resolution limit [Å] | 2.540 | 2.657 | 2.540 |
Number of reflections | 24643 | 1141 | 1158 |
<I/σ(I)> | 19.7 | 1.37 | 1.2 |
Completeness [%] | 95.1 | 81.9 | 79.3 |
Redundancy | 10.9 | 11.7 | 11.5 |
CC(1/2) | 0.998 | 0.579 | 0.543 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 9.25 | 291 | PEG 300, glycine, LZNV |