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7Q0M

Crystal structure of the peptide transporter YePEPT-K314A in complex with LZNV at 2.66 A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths88.398, 100.372, 103.084
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.960 - 2.540
R-factor0.2683
Rwork0.267
R-free0.29140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7q0l
Data reduction softwareXDS
Data scaling softwareAimless (0.7.1)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.8502.7482.660
High resolution limit [Å]2.5402.6572.540
Number of reflections2464311411158
<I/σ(I)>19.71.371.2
Completeness [%]95.181.979.3
Redundancy10.911.711.5
CC(1/2)0.9980.5790.543
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION9.25291PEG 300, glycine, LZNV

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PDB entries from 2024-05-15

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