Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7Q03

Ketol-acid reductoisomerase from Methanothermococcus thermolithotrophicus in the close state with NADP and Mg2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-11-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.73913
Spacegroup nameI 2 3
Unit cell lengths129.882, 129.882, 129.882
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.070 - 2.100
R-factor0.1886
Rwork0.176
R-free0.18860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tsk
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.9202.210
High resolution limit [Å]2.1002.100
Rmerge0.0950.744
Rmeas0.0980.774
Rpim0.0260.212
Number of reflections214083090
<I/σ(I)>18.33.5
Completeness [%]100.0100
Redundancy14.313.3
CC(1/2)0.9990.468
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8291.15The reservoir was filled with 90 ul of crystallisation solution: 20% (w/v) PEG 6000, 100 mM Tris/HCl pH 8.0 and 200 mM lithium chloride. The protein was crystallized at 13 mg/ml in the following buffer 25 mM Tris/HCl pH 7.6, 2 mM dithiothreitol, 10% (v/v) glycerol. Drops of 0.7 ul protein with 0.7 ul of crystallisation solution were applied on the shelf. Crystals were soaked in the crystallisation solution supplemented with 30% (v/v) ethylene glycol for few seconds before freezing in liquid nitrogen.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon