7PSP
Crystal structure of S100A4 labeled with NU000846b.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-24 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 109.540, 109.540, 89.870 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 54.770 - 2.610 |
R-factor | 0.2473 |
Rwork | 0.245 |
R-free | 0.28570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3c1v |
RMSD bond length | 0.002 |
RMSD bond angle | 0.520 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.200 | 2.680 |
High resolution limit [Å] | 2.610 | 2.610 |
Rmerge | 0.074 | |
Rmeas | 0.076 | |
Rpim | 0.018 | |
Number of reflections | 18350 | 10160 |
<I/σ(I)> | 0.1467 | |
Completeness [%] | 99.9 | |
Redundancy | 1.8 | |
CC(1/2) | 1.000 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Labelled protein in 3M sodium chloride, 0.1M citrate, pH 3.5 |