7PRP
Crystal Structure of the B subunit of heat labile enterotoxin LT-IIc from Escherichia coli in apo form
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.402, 73.688, 102.354 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.981 - 2.300 |
Rwork | 0.196 |
R-free | 0.24480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5g3l |
RMSD bond length | 0.015 |
RMSD bond angle | 1.599 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.032) |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.000 | 2.390 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.096 | 0.455 |
Rmeas | 0.125 | 0.597 |
Rpim | 0.079 | 0.382 |
Number of reflections | 24817 | 9279 |
<I/σ(I)> | 8.1 | 2.5 |
Completeness [%] | 99.6 | 97.2 |
Redundancy | 3.7 | 3.6 |
CC(1/2) | 0.996 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 292 | 2.4 sodium formation and 100 mM citric acid pH 4.0. |