7PFB
2 minute Fe2+ soaked structure of SynFtn Variant D65A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 177.240, 177.240, 177.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.662 - 1.700 |
R-factor | 0.1751 |
Rwork | 0.174 |
R-free | 0.19920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 5OUW |
RMSD bond length | 0.006 |
RMSD bond angle | 0.708 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.310 | 44.310 | 1.700 |
High resolution limit [Å] | 1.660 | 7.430 | 1.660 |
Rmerge | 0.092 | 0.036 | 3.829 |
Rmeas | 0.093 | 0.037 | 3.853 |
Rpim | 0.011 | 0.004 | 0.434 |
Total number of observations | 2221649 | 25264 | 162799 |
Number of reflections | 28740 | 407 | 2083 |
<I/σ(I)> | 33.8 | 107.2 | 1.8 |
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 77.3 | 62.1 | 78.2 |
CC(1/2) | 1.000 | 1.000 | 0.732 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 289 | 2M NaCl |