7PEG
Structure of the sporulation/germination protein YhcN from Bacillus subtilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 273 |
Detector technology | PIXEL |
Collection date | 2018-11-14 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 31.480, 52.280, 134.130 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.270 - 1.770 |
R-factor | 0.2066 |
Rwork | 0.205 |
R-free | 0.23420 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.009 |
RMSD bond angle | 1.193 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | Arcimboldo |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.270 | 41.270 | 1.870 |
High resolution limit [Å] | 1.770 | 5.260 | 1.770 |
Rmerge | 0.066 | 0.052 | 0.557 |
Rmeas | 0.074 | 0.060 | 0.626 |
Number of reflections | 22053 | 927 | 3302 |
<I/σ(I)> | 13.16 | 23.79 | 2.75 |
Completeness [%] | 98.3 | 97 | 98.4 |
Redundancy | 4.63 | 4.29 | 4.76 |
CC(1/2) | 0.994 | 0.989 | 0.847 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 100 mM HEPES pH 7.5, 20% (w/v) PEG 8,000 |