7PCS
Structure of the heterotetrameric SDR family member BbsCD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.3 |
Synchrotron site | BESSY |
Beamline | 14.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-12 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.894 |
Spacegroup name | P 31 |
Unit cell lengths | 68.600, 68.600, 191.960 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.700 - 2.250 |
R-factor | 0.1847 |
Rwork | 0.184 |
R-free | 0.20960 |
Structure solution method | MAD |
RMSD bond length | 0.006 |
RMSD bond angle | 0.772 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | SHELXCD |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.540 | 2.370 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.049 | 0.388 |
Rmeas | 0.058 | 0.461 |
Rpim | 0.031 | 0.247 |
Number of reflections | 46066 | 6818 |
<I/σ(I)> | 19.5 | 3.9 |
Completeness [%] | 96.1 | 96.4 |
Redundancy | 3.4 | 3.3 |
CC(1/2) | 0.999 | 0.858 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 35 mg/ml BbsCD, 2mM NAD+, 2mM benzylsuccinyl-CoA, 0.2 M Mg(CH3COO)2, 0.1 M sodium cacodylate, pH 6.5 and 20% (w/v) PEG 8000 |