7P9D
Crystal structure of Chlamydomonas reinhardtii NADPH Dependent Thioredoxin Reductase 1 domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.976 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 85.062, 85.062, 87.053 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.570 - 1.990 |
R-factor | 0.1812 |
Rwork | 0.179 |
R-free | 0.21310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3d8x |
RMSD bond length | 0.009 |
RMSD bond angle | 1.566 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.110 |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.156 | 1.757 |
Rmeas | 0.157 | 1.371 |
Number of reflections | 22317 | 3471 |
<I/σ(I)> | 15.9 | |
Completeness [%] | 99.7 | 98 |
Redundancy | 25.7 | 25.6 |
CC(1/2) | 0.999 | 0.857 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 285.15 | 0.1M mixture of DL-Glutamic acid monohydrate, DL-Alanine, Glycine, DL-Lysine monohydrochloride, DL-Serine; 0.1 M of Tris (base), BICINE with pH-8.5; 20% of v/v Ethylene glycol, 10 % of w/v PEG 8000 |