7P83
Crystal structure of Apo form of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 75.381, 75.381, 280.435 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.777 - 2.218 |
R-factor | 0.2047 |
Rwork | 0.203 |
R-free | 0.24310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7p82 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.676 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.780 | 2.350 |
High resolution limit [Å] | 2.218 | 2.220 |
Rmeas | 0.134 | 0.986 |
Number of reflections | 46906 | 7371 |
<I/σ(I)> | 16.62 | |
Completeness [%] | 99.8 | 99 |
Redundancy | 15.79 | |
CC(1/2) | 0.999 | 0.883 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293.15 | 0.1 M sodium acetate pH 4.6, 40% (v/v) PEG200 |