7P38
4,6-alpha-glucanotransferase GtfB from Limosilactobacillus reuteri NCC 2613
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-17 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 107.354, 134.495, 147.886 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.240 - 2.700 |
R-factor | 0.2618 |
Rwork | 0.260 |
R-free | 0.29870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Obtained from Phyre homology modeling |
RMSD bond length | 0.007 |
RMSD bond angle | 1.160 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (5.8.0210) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.240 | 47.240 | 2.770 |
High resolution limit [Å] | 2.695 | 11.750 | 2.700 |
Rmerge | 0.255 | 0.088 | 1.191 |
Rmeas | 0.273 | 0.094 | 1.270 |
Rpim | 0.094 | 0.032 | 0.434 |
Number of reflections | 59781 | 822 | 4540 |
<I/σ(I)> | 6.1 | ||
Completeness [%] | 99.9 | 98.7 | 99 |
Redundancy | 8.2 | 7.4 | 8.3 |
CC(1/2) | 0.955 | 0.997 | 0.803 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.4-1.7 M (NH4)2SO4, 0.1 M Bis-Tris-HCl, pH 5.5 |