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7P38

4,6-alpha-glucanotransferase GtfB from Limosilactobacillus reuteri NCC 2613

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-17
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.0332
Spacegroup nameP 21 21 21
Unit cell lengths107.354, 134.495, 147.886
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.240 - 2.700
R-factor0.2618
Rwork0.260
R-free0.29870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Obtained from Phyre homology modeling
RMSD bond length0.007
RMSD bond angle1.160
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER (2.7.17)
Refinement softwareREFMAC (5.8.0210)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.24047.2402.770
High resolution limit [Å]2.69511.7502.700
Rmerge0.2550.0881.191
Rmeas0.2730.0941.270
Rpim0.0940.0320.434
Number of reflections597818224540
<I/σ(I)>6.1
Completeness [%]99.998.799
Redundancy8.27.48.3
CC(1/2)0.9550.9970.803
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2931.4-1.7 M (NH4)2SO4, 0.1 M Bis-Tris-HCl, pH 5.5

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PDB entries from 2024-05-15

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